Plot Methods

SBMLKinetics.KineticAnalyzer.plotKTypeDistribution(self, path='', fileName='KTypeDistribution.pdf')

Plot the kinetics type distribution and save it as a pdf file.

Args:

path: str-path to the file, with a format like D:/path/to/ (or D:\\path\\ to\\)

fileName: str-file name with which the pdf file save to, ending with “.pdf”.

SBMLKinetics.KineticAnalyzer.plotKTypeDistributionPerRType(self, R_type, path='', fileName='KTypeDistributionPerRType.pdf')

Plot the kinetics type distribution for a certain reaction type and save it as a pdf file.

Args:

R_type: an object with attributes rct_num and prd_num representing the number of reactants and products.

rct_num: int-0, 1, 2, 3 (representing > 2).

prd_num: int-0, 1, 2, 3 (representing > 2).

path: str-path to the file, with a format like D:/path/to/ (or D:\\path\\ to\\)

fileName: str-file name with which the pdf file save to, ending with “.pdf”.

SBMLKinetics.KineticAnalyzer.plotKTypeDistributionVsRType(self, path='', fileName='KTypeDistributionVsRType.pdf')

Plot the kinetics type distribution vs each reaction type and save it as a pdf file.

Args:

path: str-path to the file, with a format like D:/path/to/ (or D:\\path\\ to\\)

fileName: str-file name with which the pdf file save to, ending with ‘.pdf’.

SBMLKinetics.KineticAnalyzer.plotRTypeDistribution(self, path='', fileName='RTypeDistribution.pdf')

Plot the distribution of reaction involved for reaction type and save it as a pdf file.

Args:

path: str-path to the file, with a format like D:/path/to/ (or D:\\path\\ to\\)

fileName: str-file name with which the pdf file save to, ending with ‘.pdf’.

SBMLKinetics.KineticAnalyzer.plotRTypeDistributionPerModel(self, path='', fileName='RTypeDistributionPerModel.pdf')

Plot the distribution of reactions involved for each reaction type per model and save it as a pdf file.

Args:

path: str-path to the file, with a format like D:/path/to/ (or D:\\path\\ to\\)

fileName: str-file name with which the pdf file save to, ending with ‘.pdf’.